CDS

Accession Number TCMCG016C14277
gbkey CDS
Protein Id OMO77130.1
Location complement(join(10523..10750,11004..11150,11892..12138,12828..13922,14413..14516,14906..14976,15133..15225,15890..16046,16271..16417,16527..16637,17152..17268,17351..17628,18969..19012,19134..19465,19571..19699))
Organism Corchorus capsularis
locus_tag CCACVL1_15197

Protein

Length 1099aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010793.1
Definition Kinetochore protein Ndc80 [Corchorus capsularis]
Locus_tag CCACVL1_15197

EGGNOG-MAPPER Annotation

COG_category D
Description Kinetochore protein ndc80
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11547        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000070        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000775        [VIEW IN EMBL-EBI]
GO:0000776        [VIEW IN EMBL-EBI]
GO:0000777        [VIEW IN EMBL-EBI]
GO:0000778        [VIEW IN EMBL-EBI]
GO:0000779        [VIEW IN EMBL-EBI]
GO:0000780        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007080        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008608        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031262        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050000        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051303        [VIEW IN EMBL-EBI]
GO:0051310        [VIEW IN EMBL-EBI]
GO:0051315        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATAATGCAATAGGGTTTATTGAACTTGCTGATTATTGTGCCAATAAAGGCCGCGCTGCCGGTACAAGCTTTTGTAGTACCCTTGCAGGACTTTTAATTAGATTGGCAGGTGATTTTCATCAGGCTACAATCCCAGTTGATCTCATACTGAGGCTTTATGCAATGGGGCTAGATTTCTCTGAGTGCAATATTAAGTCAGAACATGATGATTTTGACACCTCCAGAGGAGCAGAAGATGATTATGCTGTTAAAGTTTTGTTTCTTGAAAGAGATAAGATACAGAATTTGTCTGCTTTACTTGGTTCCCTCGGGAATTGCTTTAACATTGGTAAAAGGAAGAGATACATTATATCCGATATGGAATGTATGAATTTGGTTAATCAAATGTCTTTGCAGCCTGAATCCAAGGGTCAGTGTTCTATGACTTGCAAGGACAGAAAGGCTTATCTAGTAATGACGCATTTTATCAGTTCTGTGATTGTTTCTTTTCTCTTGAAAGAACTGTCTCACAGAGCATCTTGGGCTTTTGTTCAACATTTATGTGAGATGTTTACTGATAAGAAGAAGCATTTTGATAATGATCTGTCAGAAGATGCTATCAGAGATTTGATCACTGATGCATGTACTACTAGTGCTTTTCTTTTGGAAGTTCTCCATGCATCTGGCAATCTTAAGGTAAAACGAATTATGGCAGAGAGTCTTGAAAATTGGGCTGCGGCTGAAAATTTGTTTAAACTGTTGCCAGGTCCTATGCCTTTGATAAAACAATGTGTTAAGATAGAGTGTAAACTCTATAAACATGTCGATGCAGAGGTTATAGCTTCAACCTTATGTTGCGACCTGTTGTCTTCTGCAAAAGTGTCAAAGAGGACAATTGGCAAACTCTTAGAGCAGAAAAACTTATTTGGGAAAACACGCACCCCTGGAACTGCAGCCTGCCATCAGTTAGCAACTGCTTATTGCTTACATGCACTATGTACCCAGGAAGCTGACCCAAACTCAGAGCAAGTTTATCAAGATATATGTGCTGCCTTAGATCTGTGGTTGAGCATATTTGCTTCTGATTGTTGCTCCATTGATGATGAGTTCAAAATGGAGTCTGGAAACTCACTGCCACTGCTATATAACATTCTTGACTTGCTACCGATGAAGGAGACTAAGTCATGCGCTTTGTGTCTCTCCAGTAAATGGGGCCTTTATGATAAACTTATCGAGCATCGTGGTGAAAGATCCAAATCCATTGATTTCTGGATAAATTGTCTAAGTGGGTCCCAACCAGGAGTTCTTGGGTTCCAACAGAACCTCACAGGTGTTATGGTTGTTAGGAGTCATTCAAATGTAAATCTGAAATCTAAATGCAAAATGGAGGTAAATGAGAGTTTCCTTAAACTTGTTCTTGGAGTAAATGAGATTCATCTGGAGGACACCATCTCTAGAGAGCCCATAATTTTAGTTTTGGACTGTGATATCCAGATCCCTTGGATGCATTTTATTTTTGAAATCCCAGCGGCGATCTCAGCAGCATGCAAGATGAATTCGAGAACTGGTTTAGGGATAAAGGCAGTAGCAAGCACAAGGCGAGCAAAAATGAGGGGTACCACGCGCCGCCGTCCCACTGACTCTTTCAATCCTCCGGTGATACAATCGTCGCGCGACTCTGATGCCAGTTTTGCCAGCAGCCGGCCCTCTTCCATTGGCATGGGCCGCGCCATCTCCGTCGCCGAACCTTACTCCGACCGTTCCTTCCAAGCGGCCACCATCCGTTCTATCAACGCCTTTTTCTCCTCCCATTCCATCCCCCCTATCTCCACCAAACCCTCTCAAGCCCCTTCCGCGAAGGAAATCTCCAATATCCTTACCTCCCTTCTTTCCCATCTCCATTTCCCTTGCTCCAAACTCGAAGAAGACCTAGGTTTCCTCCTGAAATCCCTGAATTGCCCCTTCAAATTCAACAAATCTACGCTCCGGGCGCCTAATACTCCCCACAACTGGCCTACTTCGTTGGGAATCATTCACTGGCTGGTCCAACTTGCTATGTACAACGAACATTTATCACAGAATCCCACAACTCCTTTTGCCCAAAGTGATAGCATGACTGAATATGCATTGGAGAGTTATTTGCGATTTATACGCGGCGAGGATGATTTATTGGAGGTTTTGGATAAGGAGTTCATGGAGAAGTTGGAAAAAGAGAGGGAAAATGTGGTTGAGAGCTCCAGGGCTTTGGAAAAGAATGTCGGAGAACTGGAGGCCAAAGCGGAGGGGCTAAGAACGGGGCCAACGGAGAGGGAACTGTTGGAGAAGGAAAAAAATGTGTTGGAGGAAGATGTGAAGAAGTTTCATGCTATAATTGCAGAGTTTACAGCAAGGATTGGATCAATGGAGAAGGTGTTGGAGGAAAAGGAGAGAGAGTTGAATGCCAAGGAAGAGGAGAGGAGGCAAATTTGCCAGGAGAATGAGGAGCTTAAGAAGAGAGTGGAGTTGCAAACTTTTAATGCTAGAGATGTGGAGAGGATGAAGAGGGAGATGCAGGCTGTGGAAAGGGATATTGGCGAGGCAGAAGTTGCCAGGAATTCGTGGGAAGATAAGTCTTGGGATCTTGATTCTACTACTAGGCAGAAGTTTAAGGAGCTTACGACGCTTGCAATGGAATGCAATCAAGCAATTAGGAGGTTAAAGCTTGGTAATGGTTTTCAGTATGAGCTGAATGCTAAAGGCTCAACACCCGCTGAGGTGATGGGGATTGACTACAAAGCTACACTTAAGCCTGAGCTTGAAAGCTATGCTGACAAAATTAGGGAGAGTTCTAAGCAAAAGTTTGAAGATATGATTCTCCTTCAGCAACAATCAAAAGATATGGCTACCAAGATTGAGGAAAAAAGAAATCGTATTTCTGCGATTCAGTCCCATATTGATGAAGTTGAAGCTCAAATAAATTTATTGAAGAAGGAAATGCACGAATATGGTTATCGATCAACTGCAGAAGCCAAGAAAATGGTTGAGGATGTCCAAACCGAGGCTCAAAAATTAGATATTGCAGAAATAGAAGCATCAGAGATTCTGAAGGCCTCTCAACTGAGGTTGCAAGAAGCAATCCGACAAAGTGAGGAGGAAATTCAGATGCATGCTCAGGAACTCTTTGTGGTGGTTGATTCAGTGTCAAAATATAAGGAGCACGTCGCATCCAAAATTTCAGAGATGAGAGCTGGCCTTGCAGAAACTGCTGCTGCTGTAGCAGATACTTACAAGGGTTCATTGCCGGCACAAGTGATTGGCAATGCCAATGCAAGTTAG
Protein:  
MDDNAIGFIELADYCANKGRAAGTSFCSTLAGLLIRLAGDFHQATIPVDLILRLYAMGLDFSECNIKSEHDDFDTSRGAEDDYAVKVLFLERDKIQNLSALLGSLGNCFNIGKRKRYIISDMECMNLVNQMSLQPESKGQCSMTCKDRKAYLVMTHFISSVIVSFLLKELSHRASWAFVQHLCEMFTDKKKHFDNDLSEDAIRDLITDACTTSAFLLEVLHASGNLKVKRIMAESLENWAAAENLFKLLPGPMPLIKQCVKIECKLYKHVDAEVIASTLCCDLLSSAKVSKRTIGKLLEQKNLFGKTRTPGTAACHQLATAYCLHALCTQEADPNSEQVYQDICAALDLWLSIFASDCCSIDDEFKMESGNSLPLLYNILDLLPMKETKSCALCLSSKWGLYDKLIEHRGERSKSIDFWINCLSGSQPGVLGFQQNLTGVMVVRSHSNVNLKSKCKMEVNESFLKLVLGVNEIHLEDTISREPIILVLDCDIQIPWMHFIFEIPAAISAACKMNSRTGLGIKAVASTRRAKMRGTTRRRPTDSFNPPVIQSSRDSDASFASSRPSSIGMGRAISVAEPYSDRSFQAATIRSINAFFSSHSIPPISTKPSQAPSAKEISNILTSLLSHLHFPCSKLEEDLGFLLKSLNCPFKFNKSTLRAPNTPHNWPTSLGIIHWLVQLAMYNEHLSQNPTTPFAQSDSMTEYALESYLRFIRGEDDLLEVLDKEFMEKLEKERENVVESSRALEKNVGELEAKAEGLRTGPTERELLEKEKNVLEEDVKKFHAIIAEFTARIGSMEKVLEEKERELNAKEEERRQICQENEELKKRVELQTFNARDVERMKREMQAVERDIGEAEVARNSWEDKSWDLDSTTRQKFKELTTLAMECNQAIRRLKLGNGFQYELNAKGSTPAEVMGIDYKATLKPELESYADKIRESSKQKFEDMILLQQQSKDMATKIEEKRNRISAIQSHIDEVEAQINLLKKEMHEYGYRSTAEAKKMVEDVQTEAQKLDIAEIEASEILKASQLRLQEAIRQSEEEIQMHAQELFVVVDSVSKYKEHVASKISEMRAGLAETAAAVADTYKGSLPAQVIGNANAS